ChIP-seq motif ROC 相关资料

【怪毛匠子】独家整理

不可以转载

MEME工具

http://meme-suite.org

DNA motif 搜索算法总结

http://www.bbioo.com/lifesciences/40-115984-1.html

online tools

http://chipseek.cgu.edu.tw/main_menu.py

RSAT

http://rsat.sb-roscoff.fr

https://bioconductor.org/help/course-materials/2010/EMBL2010/100609-multtestindepfilt-huber.pdf

ROC sensitivity……

http://wiki.biouml.org/index.php/ROC-curves_in_overlapped_ChIP-Seq_peaks_(analysis)

BioUML ROC

http://ie.biouml.org/bioumlweb/#

http://blog.sina.com.cn/s/blog_7158f28601012yi6.html

fastax-tookit

An improved ChIP-seq peak detection system for simultaneously identifying post-translational modified transcription factors by combinatorial fusion, using SUMOylation as an example

http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-S1-S1

http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-11-237

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

http://biowhat.ucsd.edu/homer/motif/index.html

biowhat