使用conda安装vep
conda install ensembl-vep vep
报错
Compress::Raw::Zlib version 2.201 required--this is only version 2.105 at /xxxx/lib/perl5/site_perl/Compress/Zlib.pm line 11.
BEGIN failed--compilation aborted at /xxxx/lib/perl5/site_perl/Compress/Zlib.pm line 11.
Compilation failed in require at /xxxx/share/ensembl-vep-110.0-0/Bio/EnsEMBL/Variation/ProteinFunctionPredictionMatrix.pm line 83.
BEGIN failed--compilation aborted at /xxxx/share/ensembl-vep-110.0-0/Bio/EnsEMBL/Variation/ProteinFunctionPredictionMatrix.pm line 83.
Compilation failed in require at /xxxx/share/ensembl-vep-110.0-0/Bio/EnsEMBL/Variation/TranscriptVariationAllele.pm line 74.
BEGIN failed--compilation aborted at /xxxx/share/ensembl-vep-110.0-0/Bio/EnsEMBL/Variation/TranscriptVariationAllele.pm line 74.
Compilation failed in require at /xxxx/share/ensembl-vep-110.0-0/Bio/EnsEMBL/Variation/TranscriptVariation.pm line 68.
报错解决
conda update -c conda-forge perl-compress-raw-zlib
参考:https://github.com/Ensembl/ensembl-vep/issues/1378