在miniconda环境中找不到模块错误Bio

问题描述

我将bio python安装为

I installed bio python as

pip install biopython 以及 conda install -c conda-forge biopython .我在站点包中看到了.由于某些原因，存在 Bio 依赖性.如何解决这种依赖性?

pip install biopython as well as conda install -c conda-forge biopython. I see in site-packages. for some reason there is Bio dependency. How do I resolve this dependency?

 Type "help", "copyright", "credits" or "license" for more information.
>>> import bio
>>> bio.__version__
'1.75'
>>> from bio import pairwise2
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File ".../miniconda/lib/python3.7/site-packages/bio/pairwise2.py", line 246, in <module>
    from Bio import BiopythonWarning
ModuleNotFoundError: No module named 'Bio'
>>>

推荐答案

显然，在 sitepackages 中将 bio 重命名为 Bio ，然后它有效

Apparently, renaming bio as Bio in sitepackages then it works

Python 3.7.4 (default, Aug 13 2019, 15:17:50)
[Clang 4.0.1 (tags/RELEASE_401/final)] :: Anaconda, Inc. on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import Bio
>>> from Bio import pairwise2
>>>

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