无法与FIJI“链接" SimpleITK :: Show()

问题描述

我正在Ubuntu上运行.当调用SimpleITK的Show方法时，无法在FIJI(ImageJ2)窗口中查看此类图像.

I am running on Ubuntu. When calling the Show method of SimpleITK I am not being able to view such image in my FIJI ( ImageJ2) window.

鉴于FIJI是可移植的应用程序，是否有必要执行更多处理才能正确链接Show方法?

Given that FIJI is a portable application, is it necessary to perform some more process in order to properly link Show method with it?

预先感谢

推荐答案

SimpleITK需要外部图像查看器来显示图像(ImageJ，3DSlicer，ITK-Snap等).

SimpleITK requires an external image viewer to display images (ImageJ, 3DSlicer, ITK-Snap, etc).

ImageJ安装

1. 转到 https://imagej.nih.gov/ij/download.html
2. 请确保下载bundled with 64-bit Java 1.8.0_112版本

1. Go to https://imagej.nih.gov/ij/download.html
2. Make sure to download the bundled with 64-bit Java 1.8.0_112 version

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ImageJ设置

1. 转到 https://imagej.nih.gov/ij/plugins/nifti .html
2. 下载nifti_io.jar
3. 转到C:\blah\blah\ImageJ\plugins\Input-Output
4. 从文件夹中删除现有的nifti_io.jar文件
5. 将下载的nifti_io.jar文件复制到文件夹中
6. 重新启动ImageJ并检查File -> Import -> NIfTI-Analyze是否存在
7. 如果已存在，则表明插件已成功安装

1. Go to https://imagej.nih.gov/ij/plugins/nifti.html
2. Download nifti_io.jar
3. Go to C:\blah\blah\ImageJ\plugins\Input-Output
4. Delete the existing nifti_io.jar file from the folder
5. Copy the downloaded nifti_io.jar file into the folder
6. Restart ImageJ and check if File -> Import -> NIfTI-Analyze is there
7. If it is there, the plugin was successfully installed

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SimpleITK设置

1. 找到您的ImageJ.exe文件所在的路径
2. 打开cmd
3. 键入setx SITK_SHOW_COMMAND "C:\blah\blah\ImageJ\ImageJ.exe"
4. 您应该收到消息SUCCESS: Specified value was saved

1. Find the path where your ImageJ.exe file exists
2. Open cmd
3. Type in setx SITK_SHOW_COMMAND "C:\blah\blah\ImageJ\ImageJ.exe"
4. You should get the message SUCCESS: Specified value was saved

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检查是否一切正常

1. 重新启动文本编辑器或IDE(如果已打开)
2. 运行代码

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